{"id":221,"date":"2019-03-08T00:08:09","date_gmt":"2019-03-08T00:08:09","guid":{"rendered":"https:\/\/ccsb.scripps.edu\/adcpv11\/?page_id=221"},"modified":"2025-07-03T18:28:30","modified_gmt":"2025-07-03T18:28:30","slug":"downloads","status":"publish","type":"page","link":"https:\/\/ccsb.scripps.edu\/adcpv11\/downloads\/","title":{"rendered":"Downloads"},"content":{"rendered":"<div class=\"fusion-fullwidth fullwidth-box fusion-builder-row-1 nonhundred-percent-fullwidth non-hundred-percent-height-scrolling\" style=\"--awb-border-radius-top-left:0px;--awb-border-radius-top-right:0px;--awb-border-radius-bottom-right:0px;--awb-border-radius-bottom-left:0px;--awb-flex-wrap:wrap;\" ><div class=\"fusion-builder-row fusion-row\"><div class=\"fusion-layout-column fusion_builder_column fusion-builder-column-0 fusion_builder_column_1_1 1_1 fusion-one-full fusion-column-first fusion-column-last\" style=\"--awb-bg-size:cover;--awb-margin-bottom:0px;\"><div class=\"fusion-column-wrapper fusion-flex-column-wrapper-legacy\"><div class=\"fusion-title title fusion-title-1 fusion-sep-none fusion-title-text fusion-title-size-one\" style=\"--awb-margin-top-small:10px;--awb-margin-right-small:0px;--awb-margin-bottom-small:10px;--awb-margin-left-small:0px;\"><h1 class=\"fusion-title-heading title-heading-left\" style=\"margin:0;\"><h3>Download ADCP v1.1<\/h3><\/h1><\/div><div class=\"fusion-text fusion-text-1\"><p>ADCP v1.1 is currently only available for Linux. Below we provide instructions for installing the micromamba cross-platform package manager and using it to install ADCP v1.1. The ADCP installation script uses or creates a micromamba environment called adcpsuite with Python 3.7 and installs all dependencies needed to run ADCP v1.1 as well as <a href=\"http:\/\/ccsb.scripps.edu\/agfr\">agfrgui for generating target files<\/a> describing receptors, among others.<\/p>\n<\/div><div class=\"fusion-clearfix\"><\/div><\/div><\/div><div class=\"fusion-layout-column fusion_builder_column fusion-builder-column-1 fusion_builder_column_4_5 4_5 fusion-four-fifth fusion-column-first\" style=\"--awb-bg-size:cover;width:80%;width:calc(80% - ( ( 4% ) * 0.8 ) );margin-right: 4%;\"><div class=\"fusion-column-wrapper fusion-column-has-shadow fusion-flex-column-wrapper-legacy\"><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:20px;margin-bottom:20px;width:100%;\"><div class=\"fusion-separator-border sep-shadow\" style=\"--awb-height:20px;--awb-amount:20px;background:radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);background:-webkit-radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);background:-moz-radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);background:-o-radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-text fusion-text-2\"><div class=\"page_header floating_element\">\n<h3>Installation Instructions for Linux with micromamba<\/h3>\n<div><\/div>\n<\/div>\n<\/div><div class=\"fusion-tabs fusion-tabs-1 clean vertical-tabs icon-position-left mobile-mode-accordion\" style=\"--awb-title-border-radius-top-left:0px;--awb-title-border-radius-top-right:0px;--awb-title-border-radius-bottom-right:0px;--awb-title-border-radius-bottom-left:0px;--awb-alignment:start;--awb-inactive-color:#ffffff;--awb-background-color:#779ff4;--awb-border-color:#ebeaea;--awb-active-border-color:#779ff4;\"><div class=\"nav\"><ul class=\"nav-tabs\" role=\"tablist\"><li class=\"active\" role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-7556a55c6bd092c9754\" aria-selected=\"true\" id=\"fusion-tab-installmicromamba\" href=\"#tab-7556a55c6bd092c9754\"><h4 class=\"fusion-tab-heading\">Install micromamba<\/h4><\/a><\/li><li role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-1720e86e620fe713bc7\" aria-selected=\"false\" tabindex=\"-1\" id=\"fusion-tab-installadcpv1.1\" href=\"#tab-1720e86e620fe713bc7\"><h4 class=\"fusion-tab-heading\">Install ADCP v1.1<\/h4><\/a><\/li><li role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-2e5ca7bdeedcf6ddf18\" aria-selected=\"false\" tabindex=\"-1\" id=\"fusion-tab-usethesoftware\" href=\"#tab-2e5ca7bdeedcf6ddf18\"><h4 class=\"fusion-tab-heading\">Use the software<\/h4><\/a><\/li><\/ul><\/div><div class=\"tab-content\"><div class=\"nav fusion-mobile-tab-nav\"><ul class=\"nav-tabs\" role=\"tablist\"><li class=\"active\" role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-7556a55c6bd092c9754\" aria-selected=\"true\" id=\"mobile-fusion-tab-installmicromamba\" href=\"#tab-7556a55c6bd092c9754\"><h4 class=\"fusion-tab-heading\">Install micromamba<\/h4><\/a><\/li><\/ul><\/div><div class=\"tab-pane fade fusion-clearfix in active\" role=\"tabpanel\" tabindex=\"0\" aria-labelledby=\"fusion-tab-installmicromamba\" id=\"tab-7556a55c6bd092c9754\">\n<p>In a shell, go to your home folder and fetch the micromamba binary:<\/p>\n<style type=\"text\/css\" scopped=\"scopped\">.fusion-syntax-highlighter-1 > .CodeMirror, .fusion-syntax-highlighter-1 > .CodeMirror .CodeMirror-gutters {background-color:var(--awb-color1);}<\/style><div class=\"fusion-syntax-highlighter-container fusion-syntax-highlighter-1 fusion-syntax-highlighter-theme-light\" style=\"opacity:0;margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px;font-size:14px;border-width:1px;border-style:solid;border-color:var(--awb-color3);\"><div class=\"syntax-highlighter-copy-code\"><span class=\"syntax-highlighter-copy-code-title\" data-id=\"fusion_syntax_highlighter_1\" style=\"font-size:14px;\">Copy to Clipboard<\/span><\/div><label for=\"fusion_syntax_highlighter_1\" class=\"screen-reader-text\">Syntax Highlighter<\/label><textarea class=\"fusion-syntax-highlighter-textarea\" id=\"fusion_syntax_highlighter_1\" data-readOnly=\"nocursor\" data-lineNumbers=\"\" data-lineWrapping=\"\" data-theme=\"default\" data-mode=\"text\/x-sh\">cd ~; curl -Ls https:\/\/micro.mamba.pm\/api\/micromamba\/linux-64\/latest | tar -xvj bin\/micromamba<\/textarea><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:15px;margin-bottom:15px;width:100%;\"><div class=\"fusion-separator-border sep-double sep-solid\" style=\"--awb-height:20px;--awb-amount:20px;border-color:#e0dede;border-top-width:2px;border-bottom-width:2px;\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div>\n<p>Install micromamba:<\/p>\n<style type=\"text\/css\" scopped=\"scopped\">.fusion-syntax-highlighter-2 > .CodeMirror, .fusion-syntax-highlighter-2 > .CodeMirror .CodeMirror-gutters {background-color:var(--awb-color1);}<\/style><div class=\"fusion-syntax-highlighter-container fusion-syntax-highlighter-2 fusion-syntax-highlighter-theme-light\" style=\"opacity:0;margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px;font-size:14px;border-width:1px;border-style:solid;border-color:var(--awb-color3);\"><div class=\"syntax-highlighter-copy-code\"><span class=\"syntax-highlighter-copy-code-title\" data-id=\"fusion_syntax_highlighter_2\" style=\"font-size:14px;\">Copy to Clipboard<\/span><\/div><label for=\"fusion_syntax_highlighter_2\" class=\"screen-reader-text\">Syntax Highlighter<\/label><textarea class=\"fusion-syntax-highlighter-textarea\" id=\"fusion_syntax_highlighter_2\" data-readOnly=\"nocursor\" data-lineNumbers=\"\" data-lineWrapping=\"\" data-theme=\"default\" data-mode=\"text\/x-sh\">bin\/micromamba shell init -s bash -p `pwd`\/micromamba<\/textarea><\/div>\n<div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:15px;margin-bottom:15px;width:100%;\"><div class=\"fusion-separator-border sep-double sep-solid\" style=\"--awb-height:20px;--awb-amount:20px;border-color:#e0dede;border-top-width:2px;border-bottom-width:2px;\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div>\n<p>Activate micromamba:<\/p>\n<style type=\"text\/css\" scopped=\"scopped\">.fusion-syntax-highlighter-3 > .CodeMirror, .fusion-syntax-highlighter-3 > .CodeMirror .CodeMirror-gutters {background-color:var(--awb-color1);}<\/style><div class=\"fusion-syntax-highlighter-container fusion-syntax-highlighter-3 fusion-syntax-highlighter-theme-light\" style=\"opacity:0;margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px;font-size:14px;border-width:1px;border-style:solid;border-color:var(--awb-color3);\"><div class=\"syntax-highlighter-copy-code\"><span class=\"syntax-highlighter-copy-code-title\" data-id=\"fusion_syntax_highlighter_3\" style=\"font-size:14px;\">Copy to Clipboard<\/span><\/div><label for=\"fusion_syntax_highlighter_3\" class=\"screen-reader-text\">Syntax Highlighter<\/label><textarea class=\"fusion-syntax-highlighter-textarea\" id=\"fusion_syntax_highlighter_3\" data-readOnly=\"nocursor\" data-lineNumbers=\"\" data-lineWrapping=\"\" data-theme=\"default\" data-mode=\"text\/x-sh\">source ~\/.bashrc<\/textarea><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:15px;margin-bottom:15px;width:100%;\"><div class=\"fusion-separator-border sep-double sep-solid\" style=\"--awb-height:20px;--awb-amount:20px;border-color:#e0dede;border-top-width:2px;border-bottom-width:2px;\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div><\/div><div class=\"nav fusion-mobile-tab-nav\"><ul class=\"nav-tabs\" role=\"tablist\"><li role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-1720e86e620fe713bc7\" aria-selected=\"false\" tabindex=\"-1\" id=\"mobile-fusion-tab-installadcpv1.1\" href=\"#tab-1720e86e620fe713bc7\"><h4 class=\"fusion-tab-heading\">Install ADCP v1.1<\/h4><\/a><\/li><\/ul><\/div><div class=\"tab-pane fade fusion-clearfix\" role=\"tabpanel\" tabindex=\"0\" aria-labelledby=\"fusion-tab-installadcpv1.1\" id=\"tab-1720e86e620fe713bc7\">\n<p>Download the installation script <a href=\"https:\/\/ccsb.scripps.edu\/mamba\/scripts\/adcpsuite_micromamba.sh\">here<\/a> or use<\/p>\n<style type=\"text\/css\" scopped=\"scopped\">.fusion-syntax-highlighter-4 > .CodeMirror, .fusion-syntax-highlighter-4 > .CodeMirror .CodeMirror-gutters {background-color:var(--awb-color1);}<\/style><div class=\"fusion-syntax-highlighter-container fusion-syntax-highlighter-4 fusion-syntax-highlighter-theme-light\" style=\"opacity:0;margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px;font-size:14px;border-width:1px;border-style:solid;border-color:var(--awb-color3);\"><div class=\"syntax-highlighter-copy-code\"><span class=\"syntax-highlighter-copy-code-title\" data-id=\"fusion_syntax_highlighter_4\" style=\"font-size:14px;\">Copy to Clipboard<\/span><\/div><label for=\"fusion_syntax_highlighter_4\" class=\"screen-reader-text\">Syntax Highlighter<\/label><textarea class=\"fusion-syntax-highlighter-textarea\" id=\"fusion_syntax_highlighter_4\" data-readOnly=\"nocursor\" data-lineNumbers=\"\" data-lineWrapping=\"\" data-theme=\"default\" data-mode=\"text\/x-sh\">wget https:\/\/ccsb.scripps.edu\/mamba\/scripts\/adcpsuite_micromamba.sh<\/textarea><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:15px;margin-bottom:15px;width:100%;\"><div class=\"fusion-separator-border sep-double sep-solid\" style=\"--awb-height:20px;--awb-amount:20px;border-color:#e0dede;border-top-width:2px;border-bottom-width:2px;\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div>\n<p>Run the installation script:<\/p>\n<style type=\"text\/css\" scopped=\"scopped\">.fusion-syntax-highlighter-5 > .CodeMirror, .fusion-syntax-highlighter-5 > .CodeMirror .CodeMirror-gutters {background-color:var(--awb-color1);}<\/style><div class=\"fusion-syntax-highlighter-container fusion-syntax-highlighter-5 fusion-syntax-highlighter-theme-light\" style=\"opacity:0;margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px;font-size:14px;border-width:1px;border-style:solid;border-color:var(--awb-color3);\"><div class=\"syntax-highlighter-copy-code\"><span class=\"syntax-highlighter-copy-code-title\" data-id=\"fusion_syntax_highlighter_5\" style=\"font-size:14px;\">Copy to Clipboard<\/span><\/div><label for=\"fusion_syntax_highlighter_5\" class=\"screen-reader-text\">Syntax Highlighter<\/label><textarea class=\"fusion-syntax-highlighter-textarea\" id=\"fusion_syntax_highlighter_5\" data-readOnly=\"nocursor\" data-lineNumbers=\"\" data-lineWrapping=\"\" data-theme=\"default\" data-mode=\"text\/x-sh\">sh .\/adcpsuite_micromamba.sh<\/textarea><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:15px;margin-bottom:15px;width:100%;\"><div class=\"fusion-separator-border sep-double sep-solid\" style=\"--awb-height:20px;--awb-amount:20px;border-color:#e0dede;border-top-width:2px;border-bottom-width:2px;\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div>\n<p><span data-contrast=\"auto\">This should install ADCP v1.1 along with all required packages and dependencies.<br \/>\n<\/span><\/p>\n<\/div><div class=\"nav fusion-mobile-tab-nav\"><ul class=\"nav-tabs\" role=\"tablist\"><li role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-2e5ca7bdeedcf6ddf18\" aria-selected=\"false\" tabindex=\"-1\" id=\"mobile-fusion-tab-usethesoftware\" href=\"#tab-2e5ca7bdeedcf6ddf18\"><h4 class=\"fusion-tab-heading\">Use the software<\/h4><\/a><\/li><\/ul><\/div><div class=\"tab-pane fade fusion-clearfix\" role=\"tabpanel\" tabindex=\"0\" aria-labelledby=\"fusion-tab-usethesoftware\" id=\"tab-2e5ca7bdeedcf6ddf18\">\n<p>Activate the environment:<\/p>\n<style type=\"text\/css\" scopped=\"scopped\">.fusion-syntax-highlighter-6 > .CodeMirror, .fusion-syntax-highlighter-6 > .CodeMirror .CodeMirror-gutters {background-color:var(--awb-color1);}<\/style><div class=\"fusion-syntax-highlighter-container fusion-syntax-highlighter-6 fusion-syntax-highlighter-theme-light\" style=\"opacity:0;margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px;font-size:14px;border-width:1px;border-style:solid;border-color:var(--awb-color3);\"><div class=\"syntax-highlighter-copy-code\"><span class=\"syntax-highlighter-copy-code-title\" data-id=\"fusion_syntax_highlighter_6\" style=\"font-size:14px;\">Copy to Clipboard<\/span><\/div><label for=\"fusion_syntax_highlighter_6\" class=\"screen-reader-text\">Syntax Highlighter<\/label><textarea class=\"fusion-syntax-highlighter-textarea\" id=\"fusion_syntax_highlighter_6\" data-readOnly=\"nocursor\" data-lineNumbers=\"\" data-lineWrapping=\"\" data-theme=\"default\" data-mode=\"text\/x-sh\">micromamba activate adcpsuite<\/textarea><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:15px;margin-bottom:15px;width:100%;\"><div class=\"fusion-separator-border sep-double sep-solid\" style=\"--awb-height:20px;--awb-amount:20px;border-color:#e0dede;border-top-width:2px;border-bottom-width:2px;\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div>\n<p>You should now be able to runs ADCP by typing &#8220;adcp&#8221; in your shell, and AFGRgui by typing &#8220;agfrgui&#8221;.<\/p>\n<p>We provide <a href=\"https:\/\/ccsb.scripps.edu\/adcpv11\/documentation\/\">Examples commands illustrating some of ADCP&#8217;s capabilities here<\/a>, and tutorials for <a href=\"https:\/\/ccsb.scripps.edu\/agfr\/documentation\/\">using AGFR and AGFRgui are provided here<\/a>.<\/p>\n<\/div><\/div><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:20px;margin-bottom:20px;width:100%;\"><div class=\"fusion-separator-border sep-shadow\" style=\"--awb-height:20px;--awb-amount:20px;background:radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);background:-webkit-radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);background:-moz-radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);background:-o-radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-text fusion-text-3\"><div class=\"page_header floating_element\">\n<h3>Installation Instructions for Linux with conda<\/h3>\n<div><\/div>\n<\/div>\n<\/div><div class=\"fusion-tabs fusion-tabs-2 clean vertical-tabs icon-position-left mobile-mode-accordion\" style=\"--awb-title-border-radius-top-left:0px;--awb-title-border-radius-top-right:0px;--awb-title-border-radius-bottom-right:0px;--awb-title-border-radius-bottom-left:0px;--awb-alignment:start;--awb-inactive-color:#ffffff;--awb-background-color:#779ff4;--awb-border-color:#ebeaea;--awb-active-border-color:#779ff4;\"><div class=\"nav\"><ul class=\"nav-tabs\" role=\"tablist\"><li class=\"active\" role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-979c9870e2935a6c749\" aria-selected=\"true\" id=\"fusion-tab-installconda\" href=\"#tab-979c9870e2935a6c749\"><h4 class=\"fusion-tab-heading\">Install conda<\/h4><\/a><\/li><li role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-1a11dfcf77e76283f12\" aria-selected=\"false\" tabindex=\"-1\" id=\"fusion-tab-installadcpv1.1\" href=\"#tab-1a11dfcf77e76283f12\"><h4 class=\"fusion-tab-heading\">Install ADCP v1.1<\/h4><\/a><\/li><li role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-546c58ce744f8a10ec7\" aria-selected=\"false\" tabindex=\"-1\" id=\"fusion-tab-usethesoftware\" href=\"#tab-546c58ce744f8a10ec7\"><h4 class=\"fusion-tab-heading\">Use the software<\/h4><\/a><\/li><\/ul><\/div><div class=\"tab-content\"><div class=\"nav fusion-mobile-tab-nav\"><ul class=\"nav-tabs\" role=\"tablist\"><li class=\"active\" role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-979c9870e2935a6c749\" aria-selected=\"true\" id=\"mobile-fusion-tab-installconda\" href=\"#tab-979c9870e2935a6c749\"><h4 class=\"fusion-tab-heading\">Install conda<\/h4><\/a><\/li><\/ul><\/div><div class=\"tab-pane fade fusion-clearfix in active\" role=\"tabpanel\" tabindex=\"0\" aria-labelledby=\"fusion-tab-installconda\" id=\"tab-979c9870e2935a6c749\">\n<p>If you do not already have conda installed please follow <a href=\"https:\/\/docs.conda.io\/projects\/conda\/en\/stable\/user-guide\/install\/linux.html\">these instructions<\/a><\/p>\n<\/div><div class=\"nav fusion-mobile-tab-nav\"><ul class=\"nav-tabs\" role=\"tablist\"><li role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-1a11dfcf77e76283f12\" aria-selected=\"false\" tabindex=\"-1\" id=\"mobile-fusion-tab-installadcpv1.1\" href=\"#tab-1a11dfcf77e76283f12\"><h4 class=\"fusion-tab-heading\">Install ADCP v1.1<\/h4><\/a><\/li><\/ul><\/div><div class=\"tab-pane fade fusion-clearfix\" role=\"tabpanel\" tabindex=\"0\" aria-labelledby=\"fusion-tab-installadcpv1.1\" id=\"tab-1a11dfcf77e76283f12\">\n<p>Download the installation script <a href=\"https:\/\/ccsb.scripps.edu\/mamba\/scripts\/adcpsuite_conda.sh\">here<\/a> or use<\/p>\n<style type=\"text\/css\" scopped=\"scopped\">.fusion-syntax-highlighter-7 > .CodeMirror, .fusion-syntax-highlighter-7 > .CodeMirror .CodeMirror-gutters {background-color:var(--awb-color1);}<\/style><div class=\"fusion-syntax-highlighter-container fusion-syntax-highlighter-7 fusion-syntax-highlighter-theme-light\" style=\"opacity:0;margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px;font-size:14px;border-width:1px;border-style:solid;border-color:var(--awb-color3);\"><div class=\"syntax-highlighter-copy-code\"><span class=\"syntax-highlighter-copy-code-title\" data-id=\"fusion_syntax_highlighter_7\" style=\"font-size:14px;\">Copy to Clipboard<\/span><\/div><label for=\"fusion_syntax_highlighter_7\" class=\"screen-reader-text\">Syntax Highlighter<\/label><textarea class=\"fusion-syntax-highlighter-textarea\" id=\"fusion_syntax_highlighter_7\" data-readOnly=\"nocursor\" data-lineNumbers=\"\" data-lineWrapping=\"\" data-theme=\"default\" data-mode=\"text\/x-sh\">wget https:\/\/ccsb.scripps.edu\/mamba\/scripts\/adcpsuite_conda.sh<\/textarea><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:15px;margin-bottom:15px;width:100%;\"><div class=\"fusion-separator-border sep-double sep-solid\" style=\"--awb-height:20px;--awb-amount:20px;border-color:#e0dede;border-top-width:2px;border-bottom-width:2px;\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div>\n<p>Run the installation script:<\/p>\n<style type=\"text\/css\" scopped=\"scopped\">.fusion-syntax-highlighter-8 > .CodeMirror, .fusion-syntax-highlighter-8 > .CodeMirror .CodeMirror-gutters {background-color:var(--awb-color1);}<\/style><div class=\"fusion-syntax-highlighter-container fusion-syntax-highlighter-8 fusion-syntax-highlighter-theme-light\" style=\"opacity:0;margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px;font-size:14px;border-width:1px;border-style:solid;border-color:var(--awb-color3);\"><div class=\"syntax-highlighter-copy-code\"><span class=\"syntax-highlighter-copy-code-title\" data-id=\"fusion_syntax_highlighter_8\" style=\"font-size:14px;\">Copy to Clipboard<\/span><\/div><label for=\"fusion_syntax_highlighter_8\" class=\"screen-reader-text\">Syntax Highlighter<\/label><textarea class=\"fusion-syntax-highlighter-textarea\" id=\"fusion_syntax_highlighter_8\" data-readOnly=\"nocursor\" data-lineNumbers=\"\" data-lineWrapping=\"\" data-theme=\"default\" data-mode=\"text\/x-sh\">sh .\/adcpsuite_conda.sh<\/textarea><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:15px;margin-bottom:15px;width:100%;\"><div class=\"fusion-separator-border sep-double sep-solid\" style=\"--awb-height:20px;--awb-amount:20px;border-color:#e0dede;border-top-width:2px;border-bottom-width:2px;\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div>\n<p><span data-contrast=\"auto\">This should install ADCP v1.1 along with all required packages and dependencies.<br \/>\n<\/span><\/p>\n<\/div><div class=\"nav fusion-mobile-tab-nav\"><ul class=\"nav-tabs\" role=\"tablist\"><li role=\"presentation\"><a class=\"tab-link\" data-toggle=\"tab\" role=\"tab\" aria-controls=\"tab-546c58ce744f8a10ec7\" aria-selected=\"false\" tabindex=\"-1\" id=\"mobile-fusion-tab-usethesoftware\" href=\"#tab-546c58ce744f8a10ec7\"><h4 class=\"fusion-tab-heading\">Use the software<\/h4><\/a><\/li><\/ul><\/div><div class=\"tab-pane fade fusion-clearfix\" role=\"tabpanel\" tabindex=\"0\" aria-labelledby=\"fusion-tab-usethesoftware\" id=\"tab-546c58ce744f8a10ec7\">\n<p>Activate the environment:<\/p>\n<style type=\"text\/css\" scopped=\"scopped\">.fusion-syntax-highlighter-9 > .CodeMirror, .fusion-syntax-highlighter-9 > .CodeMirror .CodeMirror-gutters {background-color:var(--awb-color1);}<\/style><div class=\"fusion-syntax-highlighter-container fusion-syntax-highlighter-9 fusion-syntax-highlighter-theme-light\" style=\"opacity:0;margin-top:0px;margin-right:0px;margin-bottom:0px;margin-left:0px;font-size:14px;border-width:1px;border-style:solid;border-color:var(--awb-color3);\"><div class=\"syntax-highlighter-copy-code\"><span class=\"syntax-highlighter-copy-code-title\" data-id=\"fusion_syntax_highlighter_9\" style=\"font-size:14px;\">Copy to Clipboard<\/span><\/div><label for=\"fusion_syntax_highlighter_9\" class=\"screen-reader-text\">Syntax Highlighter<\/label><textarea class=\"fusion-syntax-highlighter-textarea\" id=\"fusion_syntax_highlighter_9\" data-readOnly=\"nocursor\" data-lineNumbers=\"\" data-lineWrapping=\"\" data-theme=\"default\" data-mode=\"text\/x-sh\">micromamba activate adcpsuite<\/textarea><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:15px;margin-bottom:15px;width:100%;\"><div class=\"fusion-separator-border sep-double sep-solid\" style=\"--awb-height:20px;--awb-amount:20px;border-color:#e0dede;border-top-width:2px;border-bottom-width:2px;\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div>\n<p>You should now be able to runs ADCP by typing &#8220;adcp&#8221; in your shell, and AFGRgui by typing &#8220;agfrgui&#8221;.<\/p>\n<p>We provide <a href=\"https:\/\/ccsb.scripps.edu\/adcpv11\/documentation\/\">Examples commands illustrating some of ADCP&#8217;s capabilities here<\/a>, and tutorials for <a href=\"https:\/\/ccsb.scripps.edu\/agfr\/documentation\/\">using AGFR and AGFRgui are provided here<\/a>.<\/p>\n<\/div><\/div><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-separator fusion-full-width-sep\" style=\"margin-left: auto;margin-right: auto;margin-top:20px;margin-bottom:20px;width:100%;\"><div class=\"fusion-separator-border sep-shadow\" style=\"--awb-height:20px;--awb-amount:20px;background:radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);background:-webkit-radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);background:-moz-radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);background:-o-radial-gradient(ellipse at 50% -50% , #e0dede 0px, rgba(255, 255, 255, 0) 80%) repeat scroll 0 0 rgba(0, 0, 0, 0);\"><\/div><\/div><div class=\"fusion-sep-clear\"><\/div><div class=\"fusion-text fusion-text-4\"><div class=\"page_header floating_element\">\n<h3>Installation Instructions for MacOS<\/h3>\n<\/div>\n<\/div><div class=\"fusion-text fusion-text-5\"><p>ADCP suite can be used on MacOS with Apple Silicon (M1\/M2) at near native speed using by running Ubuntu in a virtual machine.<\/p>\n<p>Follow<a href=\"https:\/\/rwxayheee.github.io\/ADCP-Suite-and-AGFRGUI-in-Ubuntu-VM-on-Apple-Silicon#install-the-adcp-suite\"> these instructions<\/a> to install the UTM virtualization app with an Ubuntu virtual machine running ADCP suite v1.1.<\/p>\n<\/div><div class=\"fusion-clearfix\"><\/div><\/div><\/div><\/div><\/div>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-221","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/ccsb.scripps.edu\/adcpv11\/wp-json\/wp\/v2\/pages\/221","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/ccsb.scripps.edu\/adcpv11\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/ccsb.scripps.edu\/adcpv11\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/ccsb.scripps.edu\/adcpv11\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/ccsb.scripps.edu\/adcpv11\/wp-json\/wp\/v2\/comments?post=221"}],"version-history":[{"count":43,"href":"https:\/\/ccsb.scripps.edu\/adcpv11\/wp-json\/wp\/v2\/pages\/221\/revisions"}],"predecessor-version":[{"id":467,"href":"https:\/\/ccsb.scripps.edu\/adcpv11\/wp-json\/wp\/v2\/pages\/221\/revisions\/467"}],"wp:attachment":[{"href":"https:\/\/ccsb.scripps.edu\/adcpv11\/wp-json\/wp\/v2\/media?parent=221"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}